BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033E08SP1|AL429758
(878 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1595 1174 0.0
>3x_Contig1595
Length = 10795
Score = 1174 bits (592), Expect = 0.0
Identities = 619/625 (99%), Gaps = 5/625 (0%)
Strand = Plus / Plus
Query: 5 caattgatggagagcacaccaacagtaccttcggtactggntagacgacacaaacctaag 64
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 2764 caattgatggagagcacaccaacagtaccttcggtactgg-tagacgacacaaacctaag 2822
Query: 65 cctaccacccggagtcctcactgccagtgttgccgatactgctactgctactgcccctcc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2823 cctaccacccggagtcctcactgccagtgttgccgatactgctactgctactgcccctcc 2882
Query: 125 cccttcccatcacgtgaccacggatttcataccaaaaccgtttaaagcaagcagcagtgg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2883 cccttcccatcacgtgaccacggatttcataccaaaaccgtttaaagcaagcagcagtgg 2942
Query: 185 tagcaatgccagcagtaccaccagcagtacagccggcagccatactgccacgaccacagc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2943 tagcaatgccagcagtaccaccagcagtacagccggcagccatactgccacgaccacagc 3002
Query: 245 tgaccctcgagagaaacgtaggagtggcacaccgttgctccaaatcatgcccgacgtgtc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3003 tgaccctcgagagaaacgtaggagtggcacaccgttgctccaaatcatgcccgacgtgtc 3062
Query: 305 ttcttccacgtagagcaaacacccaaaggtttttccggacttgtcacacccggaaaaatc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3063 ttcttccacgtagagcaaacacccaaaggtttttccggacttgtcacacccggaaaaatc 3122
Query: 365 agcaaatcgagagccacgatgaacaaatcccgcagtgaatgaccgggggaatctcatgga 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3123 agcaaatcgagagccacgatgaacaaatcccgcagtgaatgaccgggggaatctcatgga 3182
Query: 425 acaacctggcagatgttccatcgcagaaggggaaagggctgtaggaaaaaggacttaaga 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3183 acaacctggcagatgttccatcgcagaaggggaaagggctgtaggaaaaaggacttaaga 3242
Query: 485 ttgcggacccaccaattcggattagatcacgtcacgtcacgtga-gtgantntntaattc 543
|||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||
Sbjct: 3243 ttgcggacccaccaattcggattagatcacgtcacgtcacgtgacgtga---tttaattc 3299
Query: 544 aacaccatacacacacttaccaatccatgtgtactatcgtcgctatatacaggctcttac 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3300 aacaccatacacacacttaccaatccatgtgtactatcgtcgctatatacaggctcttac 3359
Query: 604 atagacattgtaccacgtacgaagt 628
|||||||||||||||||||||||||
Sbjct: 3360 atagacattgtaccacgtacgaagt 3384
Score = 472 bits (238), Expect = e-133
Identities = 238/238 (100%)
Strand = Plus / Plus
Query: 641 ggacacccaatagcaggagttgtcctttcgatgtatgttcacgctgcactgcactgcact 700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3398 ggacacccaatagcaggagttgtcctttcgatgtatgttcacgctgcactgcactgcact 3457
Query: 701 gcggtttggcacagcacccaaataaccggaaaacctcactctgtgacggtcaggtgaaaa 760
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3458 gcggtttggcacagcacccaaataaccggaaaacctcactctgtgacggtcaggtgaaaa 3517
Query: 761 ccgcatctgaagcagatgtcccgactgggtaggactaagaattgatctatagcttgacaa 820
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3518 ccgcatctgaagcagatgtcccgactgggtaggactaagaattgatctatagcttgacaa 3577
Query: 821 cacggctcaacgatgactgtgttgaactatgccgtttaaacaatcggggttcattcat 878
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3578 cacggctcaacgatgactgtgttgaactatgccgtttaaacaatcggggttcattcat 3635
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3518
Number of Sequences: 1807
Number of extensions: 3518
Number of successful extensions: 33
Number of sequences better than 1.0e-20: 1
length of query: 878
length of database: 10,358,551
effective HSP length: 16
effective length of query: 862
effective length of database: 10,329,639
effective search space: 8904148818
effective search space used: 8904148818
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)